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Archived data

For items listed on FlyBase prior to October 2003 please contact FlyBase
Previous Releases of FlyBase
Releases Still Active
	FB2008_06 July (Dmel Release 5.9) GBrowse BLAST FB2007_01 August (Dmel Release 5.2) GBrowse BLAST 2006 March (Dmel Release 4.3) GBrowse BLAST 2004 November (Dmel Release 3.2.2) GBrowse BLAST
Other Releases
	To activate please contact FlyBase 2008 May (FB2008_05 Dmel Release 5.8) 2008 April (FB2008_04 Dmel Release 5.7) 2008 March (FB2008_03 Dmel Release 5.6) 2008 February (FB2008_02 Dmel Release 5.5) 2008 January (FB2008_01 Dmel Release 5.5) 2007 November (FB2007_03 Dmel Release 5.4) 2007 September (FB2007_02 Dmel Release 5.3) 2006 December (FB2006_01 Dmel Release 5.1) 2005 July (Dmel Release 4.1) 2005 April (Dmel Release 4.1) 2004 August (Dmel Release 3.2.1) 2004 February (Dmel Release 3.2.0) 2003 December (Dmel Release 3.1) 2003 October (Dmel Release 3.1)
Previous Release Notes
	FB2008_06 Release notes FB2008_05 Release notes FB2008_04 Release notes FB2008_03 Release notes FB2008_02 Release notes FB2008_01 Release notes FB2007_03 Release notes FB2007_02 Release notes FB2007_01 Release notes FB2006_01 Release notes
Main Data Archives
Postgres Chado Database Dumps
	FTP releases archive (ftp://ftp.flybase.net/releases/) FB2008_06 (ftp://ftp.flybase.net/releases/FB2008_06/psql) FB2008_05 (ftp://ftp.flybase.net/releases/FB2008_05/psql) FB2008_04 (ftp://ftp.flybase.net/releases/FB2008_04/psql) FB2008_03 (ftp://ftp.flybase.net/releases/FB2008_03/psql) FB2008_02 (ftp://ftp.flybase.net/releases/FB2008_02/psql)
Sequence Data & XML Files
	FTP genomes archive (ftp://ftp.flybase.net/genomes/) FTP releases archive (ftp://ftp.flybase.net/releases/) FB2008_06 Chado-XML repository (ftp://ftp.flybase.net/releases/FB2008_06/chado-xml) FB2008_05 Chado-XML repository (ftp://ftp.flybase.net/releases/FB2008_05/chado-xml) FB2008_04 Chado-XML repository (ftp://ftp.flybase.net/releases/FB2008_04/chado-xml) FB2008_03 Chado-XML repository (ftp://ftp.flybase.net/releases/FB2008_03/chado-xml) FB2008_02 Chado-XML repository (ftp://ftp.flybase.net/releases/FB2008_02/chado-xml) FB2008_06 Reporting-XML repository (ftp://ftp.flybase.net/releases/FB2008_06/reporting-xml) FB2008_05 Reporting-XML repository (ftp://ftp.flybase.net/releases/FB2008_05/reporting-xml) FB2008_04 Reporting-XML repository (ftp://ftp.flybase.net/releases/FB2008_04/reporting-xml) FB2008_03 Reporting-XML repository (ftp://ftp.flybase.net/releases/FB2008_03/reporting-xml) FB2008_02 Reporting-XML repository (ftp://ftp.flybase.net/releases/FB2008_02/reporting-xml)
Synonyms
Item Chado XML Reporting XML Other FB2008_06 Synonyms     fb_synonym_fb_2008_06.tsv.gz FB2008_05 Synonyms     fb_synonym_fb_2008_05.tsv.gz FB2008_04 Synonyms     fb_synonym_fb_2008_04.tsv.gz FB2008_03 Synonyms     fb_synonym_fb_2008_03.tsv.gz FB2008_02 Synonyms     fb_synonym_fb_2008_02.tsv.gz
Genes
FB2008_06
Item Chado XML Reporting XML Other Genes data download download   Genetic Interaction table     gene_genetic_interactions_fb_2008_06.tsv.gz FBgn <=> DB Accession IDs     fbgn_NAseq_Uniprot_fb_2008_06.tsv.gz FBgn <=> Annotation ID     fbgn_annotation_ID_fb_2008_06.tsv.gz FBgn <=> GLEANR IDs     fbgn_gleanr_fb_2008_06.tsv.gz Genes GO data     gene_association.fb.gz Genes map table     gene_map_table_fb_2008_06.tsv.gz Gene summaries     gene_summaries.tsv.gz Orthologs     gene_orthologs_fb_2008_06.tsv.gz
FB2008_05
Item Chado XML Reporting XML Other Genes data download download   Genetic Interaction table     gene_genetic_interactions_fb_2008_05.tsv.gz FBgn <=> DB Accession IDs     fbgn_NAseq_Uniprot_fb_2008_05.tsv.gz FBgn <=> Annotation ID     fbgn_annotation_ID_fb_2008_05.tsv.gz FBgn <=> GLEANR IDs     fbgn_gleanr_fb_2008_05.tsv.gz Genes GO data     gene_association.fb.gz Genes map table     gene_map_table_fb_2008_05.tsv.gz Gene summaries     gene_summaries.tsv.gz Orthologs     gene_orthologs_fb_2008_05.tsv.gz
FB2008_04
Item Chado XML Reporting XML Other Genes data download download   Genetic Interaction table     gene_genetic_interactions_fb_2008_04.tsv.gz FBgn <=> DB Accession IDs     fbgn_NAseq_Uniprot_fb_2008_04.tsv.gz FBgn <=> Annotation ID     fbgn_annotation_ID_fb_2008_04.tsv.gz FBgn <=> GLEANR IDs     fbgn_gleanr_fb_2008_04.tsv.gz Genes GO data     gene_association.fb.gz Genes map table     gene_map_table_fb_2008_04.tsv.gz Gene summaries     gene_summaries.tsv.gz Orthologs     gene_orthologs_fb_2008_04.tsv.gz
FB2008_03
Item Chado XML Reporting XML Other Genes data download download   Genetic Interaction table     gene_genetic_interactions_fb_2008_03.tsv.gz FBgn <=> DB Accession IDs     fbgn_NAseq_Uniprot_fb_2008_03.tsv.gz FBgn <=> Annotation ID     fbgn_annotation_ID_fb_2008_03.tsv.gz FBgn <=> GLEANR IDs     fbgn_gleanr_fb_2008_03.tsv.gz Genes GO data     gene_association.fb.gz Genes map table     gene_map_table_fb_2008_03.tsv.gz Gene summaries     gene_summaries.tsv.gz Orthologs     gene_orthologs_fb_2008_03.tsv.gz
FB2008_02
Item Chado XML Reporting XML Other Genes data download download   Genetic Interaction table     gene_genetic_interactions_fb_2008_02.tsv.gz FBgn <=> DB Accession IDs     fbgn_NAseq_Uniprot_fb_2008_02.tsv.gz FBgn <=> Annotation ID     fbgn_annotation_ID_fb_2008_02.tsv.gz FBgn <=> GLEANR IDs     fbgn_gleanr_fb_2008_02.tsv.gz Genes GO data     gene_association.fb.gz Genes map table     gene_map_table_fb_2008_02.tsv.gz Gene summaries     gene_summaries.tsv.gz Orthologs     gene_orthologs_fb_2008_02.tsv.gz
Alleles and Stocks
FB2008_06
Item Chado XML Reporting XML Other Allele data download download   Stock data download download stocks_FB2008_06.tsv Genetic Interactions     allele_genetic_interactions_fb_2008_06.tsv.gz Phenotypic data     allele_phenotypic_data_fb_2008_06.tsv.gz
FB2008_05
Item Chado XML Reporting XML Other Allele data download download   Stock data download download stocks_FB2008_05.tsv Genetic Interactions     allele_genetic_interactions_fb_2008_05.tsv.gz Phenotypic data     allele_phenotypic_data_fb_2008_05.tsv.gz
FB2008_04
Item Chado XML Reporting XML Other Allele data download download   Stock data download download stocks_FB2008_04.tsv Genetic Interactions     allele_genetic_interactions_fb_2008_04.tsv.gz Phenotypic data     allele_phenotypic_data_fb_2008_04.tsv.gz
FB2008_03
Item Chado XML Reporting XML Other Allele data download download   Stock data download download stocks_FB2008_03.tsv Genetic Interactions     allele_genetic_interactions_fb_2008_03.tsv.gz Phenotypic data     allele_phenotypic_data_fb_2008_03.tsv.gz
FB2008_02
Item Chado XML Reporting XML Other Allele data download download   Stock data download download stocks_FB2008_02.tsv Genetic Interactions     allele_genetic_interactions_fb_2008_02.tsv.gz Phenotypic data     allele_phenotypic_data_fb_2008_02.tsv.gz
Nomenclature
Item Chado XML Reporting XML Other FB2008_06 list     species-abbreviations.txt FB2008_05 list     species-abbreviations.txt FB2008_04 list     species-abbreviations.txt FB2008_03 list     species-abbreviations.txt FB2008_02 list     species-abbreviations.txt
Ontology Terms
Frozen Files used for the FB2008_06 release of FlyBase
Item Chado XML Reporting XML Other FBbt: (fly_anatomy)     fly_anatomy.obo.zip FBdv: (fly_development)     fly_development.obo.zip FBcv: (controlled vocab)     flybase_controlled_vocabulary.obo.zip GO: (gene ontology)     gene_ontology.obo.zip FBbi: (image ontology)     image.obo.zip SO: (sequence ontology)     so.obo.zip
Frozen Files used for the FB2008_05 release of FlyBase
Item Chado XML Reporting XML Other FBbt: (fly_anatomy)     fly_anatomy.obo.zip FBdv: (fly_development)     fly_development.obo.zip FBcv: (controlled vocab)     flybase_controlled_vocabulary.obo.zip GO: (gene ontology)     gene_ontology.obo.zip FBbi: (image ontology)     image.obo.zip SO: (sequence ontology)     so.obo.zip
Frozen Files used for the FB2008_04 release of FlyBase
Item Chado XML Reporting XML Other FBbt: (fly_anatomy)     fly_anatomy.obo.zip FBdv: (fly_development)     fly_development.obo.zip FBcv: (controlled vocab)     flybase_controlled_vocabulary.obo.zip GO: (gene ontology)     gene_ontology.obo.zip FBbi: (image ontology)     image.obo.zip SO: (sequence ontology)     so.obo.zip
Frozen Files used for the FB2008_03 release of FlyBase
Item Chado XML Reporting XML Other FBbt: (fly_anatomy)     fly_anatomy.obo.zip FBdv: (fly_development)     fly_development.obo.zip FBcv: (controlled vocab)     flybase_controlled_vocabulary.obo.zip GO: (gene ontology)     gene_ontology.obo.zip FBbi: (image ontology)     image.obo.zip SO: (sequence ontology)     so.obo.zip
Frozen Files used for the FB2008_02 release of FlyBase
Item Chado XML Reporting XML Other FBbt: (fly_anatomy)     fly_anatomy.obo.zip FBdv: (fly_development)     fly_development.obo.zip FBcv: (controlled vocab)     flybase_controlled_vocabulary.obo.zip GO: (gene ontology)     gene_ontology.obo.zip FBbi: (image ontology)     image.obo.zip SO: (sequence ontology)     so.obo.zip
Genomes: Annotation and Sequence
All Sequenced Drosophila Species
	FTP archive (ftp://ftp.flybase.net/genomes/) Dmel FTP archive (ftp://ftp.flybase.net/genomes/Drosophila_melanogaster/) Dana FTP archive (ftp://ftp.flybase.net/genomes/Drosophila_ananassae/) Dere FTP archive (ftp://ftp.flybase.net/genomes/Drosophila_erecta/) Dgri FTP archive (ftp://ftp.flybase.net/genomes/Drosophila_grimshawi/) Dmoj FTP archive (ftp://ftp.flybase.net/genomes/Drosophila_mojavensis/) Dper FTP archive (ftp://ftp.flybase.net/genomes/Drosophila_persimilis/) Dpse FTP archive (ftp://ftp.flybase.net/genomes/Drosophila_pseudoobscura/) Dsec FTP archive (ftp://ftp.flybase.net/genomes/Drosophila_sechellia/) Dsim FTP archive (ftp://ftp.flybase.net/genomes/Drosophila_simulans/) Dvir FTP archive (ftp://ftp.flybase.net/genomes/Drosophila_virilis/) Dwil FTP archive (ftp://ftp.flybase.net/genomes/Drosophila_willistoni/) Dyak FTP archive (ftp://ftp.flybase.net/genomes/Drosophila_yakuba/)
Transcripts and Polypeptides
FB2008_06
Item Chado XML Reporting XML Other Transcript data download download   Polypeptide data download download
FB2008_05
Item Chado XML Reporting XML Other Transcript data download download   Polypeptide data download download
FB2008_04
Item Chado XML Reporting XML Other Transcript data download download   Polypeptide data download download
FB2008_03
Item Chado XML Reporting XML Other Transcript data download download   Polypeptide data download download
FB2008_02
Item Chado XML Reporting XML Other Transcript data download download   Polypeptide data download download
Transposons, Transgenic Constructs, and Insertions
FB2008_06
Item Chado XML Reporting XML Other Insertions download download   Transgenic constructs download download   Transgenic construct maps     construct_maps.zip Map data for insertions     insertion_mapping_fb_2008_06.tsv.gz Transposable elements (canonical set)     transposon_sequence_set.embl.txt.gz
FB2008_05
Item Chado XML Reporting XML Other Insertions download download   Transgenic constructs download download   Transgenic construct maps     construct_maps.zip Map data for insertions     insertion_mapping_fb_2008_05.tsv.gz Transposable elements (canonical set)     transposon_sequence_set.embl.txt.gz
FB2008_04
Item Chado XML Reporting XML Other Insertions download download   Transgenic constructs download download   Transgenic construct maps     construct_maps.zip Map data for insertions     insertion_mapping_fb_2008_04.tsv.gz Transposable elements (canonical set)     transposon_sequence_set.embl.txt.gz
FB2008_03
Item Chado XML Reporting XML Other Insertions download download   Transgenic constructs download download   Transgenic construct maps     construct_maps.zip Map data for insertions     insertion_mapping_fb_2008_03.tsv.gz Transposable elements (canonical set)     transposon_sequence_set.embl.txt.gz
FB2008_02
Item Chado XML Reporting XML Other Insertions download download   Transgenic constructs download download   Transgenic construct maps     construct_maps.zip Map data for insertions     insertion_mapping_fb_2008_02.tsv.gz Transposable elements (canonical set)     transposon_sequence_set.embl.txt.gz
Aberrations
FB2008_06
Item Chado XML Reporting XML Other Aberration data download download   Balancer data download download
FB2008_05
Item Chado XML Reporting XML Other Aberration data download download   Balancer data download download
FB2008_04
Item Chado XML Reporting XML Other Aberration data download download   Balancer data download download
FB2008_03
Item Chado XML Reporting XML Other Aberration data download download   Balancer data download download
FB2008_02
Item Chado XML Reporting XML Other Aberration data download download   Balancer data download download
Clones
FB2008_06
Item Chado XML Reporting XML Other Clone data download download   cDNAs: FBcl <=> acc. ID     cDNA_clone_data_fb_2008_06.tsv.gz Genomic: FBcl <=> acc. ID     genomic_clone_data_fb_2008_06.tsv.gz
FB2008_05
Item Chado XML Reporting XML Other Clone data download download   cDNAs: FBcl <=> acc. ID     cDNA_clone_data_fb_2008_05.tsv.gz Genomic: FBcl <=> acc. ID     genomic_clone_data_fb_2008_05.tsv.gz
FB2008_04
Item Chado XML Reporting XML Other Clone data download download   cDNAs: FBcl <=> acc. ID     cDNA_clone_data_fb_2008_04.tsv.gz Genomic: FBcl <=> acc. ID     genomic_clone_data_fb_2008_04.tsv.gz
FB2008_03
Item Chado XML Reporting XML Other Clone data download download   cDNAs: FBcl <=> acc. ID     cDNA_clone_data_fb_2008_03.tsv.gz Genomic: FBcl <=> acc. ID     genomic_clone_data_fb_2008_03.tsv.gz
FB2008_02
Item Chado XML Reporting XML Other Clone data download download   cDNAs: FBcl <=> acc. ID     cDNA_clone_data_fb_2008_02.tsv.gz Genomic: FBcl <=> acc. ID     genomic_clone_data_fb_2008_02.tsv.gz
References
Item Chado XML Reporting XML Other FB2008_06 reference data download download   FB2008_05 reference data download download   FB2008_04 reference data download download   FB2008_03 reference data download download   FB2008_02 reference data download download
News
	FB2008_06 FB2008_05 FB2008_04 FB2008_03 FB2008_02 FB2008_01 FB2007_03 FB2007_02 FB2007_01 FB2006_01
Map Conversion Tables
FB2008_06
Item Chado XML Reporting XML Other Cytological <=> Sequence     genome-cyto-seq.txt Cytological <=> Genetic     cytotable.txt Cyto <=> Genetic <=> Seq     cyto-genetic-seq.tsv Genes map table     gene_map_table_fb_2008_06.tsv.gz
FB2008_05
Item Chado XML Reporting XML Other Cytological <=> Sequence     genome-cyto-seq.txt Cytological <=> Genetic     cytotable.txt Cyto <=> Genetic <=> Seq     cyto-genetic-seq.tsv Genes map table     gene_map_table_fb_2008_05.tsv.gz
FB2008_04
Item Chado XML Reporting XML Other Cytological <=> Sequence     genome-cyto-seq.txt Cytological <=> Genetic     cytotable.txt Cyto <=> Genetic <=> Seq     cyto-genetic-seq.tsv Genes map table     gene_map_table_fb_2008_04.tsv.gz
FB2008_03
Item Chado XML Reporting XML Other Cytological <=> Sequence     genome-cyto-seq.txt Cytological <=> Genetic     cytotable.txt Cyto <=> Genetic <=> Seq     cyto-genetic-seq.tsv Genes map table     gene_map_table_fb_2008_03.tsv.gz
FB2008_02
Item Chado XML Reporting XML Other Cytological <=> Sequence     genome-cyto-seq.txt Cytological <=> Genetic     cytotable.txt Cyto <=> Genetic <=> Seq     cyto-genetic-seq.tsv Genes map table     gene_map_table_fb_2008_02.tsv.gz